Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
LGSNQ5TDP6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 TSPY15P-201ENST00000457163 923 ntBASIC17.5■□□□□ 0.39
LGSNQ5TDP6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 AL023973.1-201ENST00000624619 620 ntBASIC17.5■□□□□ 0.39
LGSNQ5TDP6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 FLJ38576-201ENST00000623820 2459 ntBASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.5■□□□□ 0.39
LGSNQ5TDP6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 UBALD1-205ENST00000590891 2641 ntBASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.49■□□□□ 0.39
LGSNQ5TDP6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.48■□□□□ 0.39
LGSNQ5TDP6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms