Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SSBP1Q04837 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP1Q04837 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SSBP1Q04837 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SSBP1Q04837 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SSBP1Q04837 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 AL355802.2-201ENST00000402069 882 ntBASIC14.67□□□□□ -0.06
SSBP1Q04837 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.67□□□□□ -0.06
SSBP1Q04837 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 AC007663.1-201ENST00000438948 1240 ntBASIC14.67□□□□□ -0.06
SSBP1Q04837 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP1Q04837 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSBP1Q04837 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SSBP1Q04837 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP1Q04837 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSBP1Q04837 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP1Q04837 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SSBP1Q04837 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.66□□□□□ -0.06
SSBP1Q04837 NEK4P2-201ENST00000580004 1012 ntBASIC14.66□□□□□ -0.06
SSBP1Q04837 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SSBP1Q04837 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP1Q04837 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.66□□□□□ -0.06
SSBP1Q04837 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSBP1Q04837 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
SSBP1Q04837 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSBP1Q04837 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SSBP1Q04837 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SSBP1Q04837 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.65□□□□□ -0.06
SSBP1Q04837 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.65□□□□□ -0.06
SSBP1Q04837 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SSBP1Q04837 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SSBP1Q04837 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms