Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 EGLN1P1-201ENST00000531623 762 ntBASIC13.93□□□□□ -0.18
PAX9P55771 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PAX9P55771 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PAX9P55771 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.93□□□□□ -0.18
PAX9P55771 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.93□□□□□ -0.18
PAX9P55771 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PAX9P55771 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.93□□□□□ -0.18
PAX9P55771 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PAX9P55771 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.93□□□□□ -0.18
PAX9P55771 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PAX9P55771 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 KRT17P2-201ENST00000300992 1314 ntBASIC13.92□□□□□ -0.18
PAX9P55771 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
PAX9P55771 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PAX9P55771 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.92□□□□□ -0.18
PAX9P55771 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.92□□□□□ -0.18
PAX9P55771 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PAX9P55771 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PAX9P55771 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PAX9P55771 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
PAX9P55771 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.91□□□□□ -0.18
PAX9P55771 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.91□□□□□ -0.18
PAX9P55771 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 COX5BP2-201ENST00000392354 334 ntBASIC13.91□□□□□ -0.18
PAX9P55771 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.91□□□□□ -0.18
PAX9P55771 MIR1238-201ENST00000408483 83 ntBASIC13.91□□□□□ -0.18
PAX9P55771 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.91□□□□□ -0.18
PAX9P55771 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
PAX9P55771 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.91□□□□□ -0.18
PAX9P55771 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PAX9P55771 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms