Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PMS1P54277 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PMS1P54277 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.06■□□□□ 0.64
PMS1P54277 KLF4P1-201ENST00000412782 1185 ntBASIC19.06■□□□□ 0.64
PMS1P54277 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.06■□□□□ 0.64
PMS1P54277 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.06■□□□□ 0.64
PMS1P54277 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.06■□□□□ 0.64
PMS1P54277 AP000867.3-201ENST00000524675 377 ntBASIC19.06■□□□□ 0.64
PMS1P54277 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.06■□□□□ 0.64
PMS1P54277 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.06■□□□□ 0.64
PMS1P54277 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 AC114341.1-201ENST00000618070 349 ntBASIC19.06■□□□□ 0.64
PMS1P54277 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.06■□□□□ 0.64
PMS1P54277 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 HCG11-201ENST00000411553 5696 ntBASIC19.06■□□□□ 0.64
PMS1P54277 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PMS1P54277 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.06■□□□□ 0.64
PMS1P54277 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.06■□□□□ 0.64
PMS1P54277 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.06■□□□□ 0.64
PMS1P54277 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PMS1P54277 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.05■□□□□ 0.64
PMS1P54277 AL118508.1-201ENST00000613502 2345 ntBASIC19.05■□□□□ 0.64
PMS1P54277 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.05■□□□□ 0.64
PMS1P54277 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 ATP5G2P1-201ENST00000433580 426 ntBASIC19.05■□□□□ 0.64
PMS1P54277 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PMS1P54277 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 AC069148.1-201ENST00000608741 768 ntBASIC19.05■□□□□ 0.64
PMS1P54277 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.05■□□□□ 0.64
PMS1P54277 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 AP000867.4-201ENST00000641616 219 ntBASIC19.05■□□□□ 0.64
PMS1P54277 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PMS1P54277 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PMS1P54277 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PMS1P54277 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PMS1P54277 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PMS1P54277 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.04■□□□□ 0.64
PMS1P54277 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.04■□□□□ 0.64
PMS1P54277 AC092329.2-201ENST00000598402 547 ntBASIC19.04■□□□□ 0.64
PMS1P54277 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.04■□□□□ 0.64
PMS1P54277 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PMS1P54277 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms