Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 AL020989.1-201ENST00000422979 469 ntBASIC16.48■□□□□ 0.23
PRPH2P23942 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.48■□□□□ 0.23
PRPH2P23942 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.48■□□□□ 0.23
PRPH2P23942 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.48■□□□□ 0.23
PRPH2P23942 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 AC092329.2-201ENST00000598402 547 ntBASIC16.48■□□□□ 0.23
PRPH2P23942 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.48■□□□□ 0.23
PRPH2P23942 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRPH2P23942 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRPH2P23942 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.47■□□□□ 0.23
PRPH2P23942 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.47■□□□□ 0.23
PRPH2P23942 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PRPH2P23942 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 SPDYE21P-201ENST00000413323 827 ntBASIC16.47■□□□□ 0.23
PRPH2P23942 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.47■□□□□ 0.23
PRPH2P23942 SIGLEC30P-201ENST00000455569 941 ntBASIC16.47■□□□□ 0.23
PRPH2P23942 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 AC073592.4-201ENST00000623827 446 ntBASIC16.47■□□□□ 0.23
PRPH2P23942 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRPH2P23942 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PRPH2P23942 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.47■□□□□ 0.23
PRPH2P23942 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRPH2P23942 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRPH2P23942 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRPH2P23942 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PRPH2P23942 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRPH2P23942 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.46■□□□□ 0.23
PRPH2P23942 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 AC148477.5-201ENST00000625164 1645 ntBASIC16.46■□□□□ 0.23
PRPH2P23942 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PRPH2P23942 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 NUS1P1-201ENST00000446295 882 ntBASIC16.46■□□□□ 0.23
PRPH2P23942 LINC00265-3P-201ENST00000447588 903 ntBASIC16.46■□□□□ 0.23
PRPH2P23942 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.46■□□□□ 0.23
PRPH2P23942 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.46■□□□□ 0.23
PRPH2P23942 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.46■□□□□ 0.23
PRPH2P23942 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PRPH2P23942 NPAP1P7-201ENST00000613027 823 ntBASIC16.46■□□□□ 0.23
PRPH2P23942 AP000550.4-202ENST00000639755 178 ntBASIC16.46■□□□□ 0.23
PRPH2P23942 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPH2P23942 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
PRPH2P23942 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRPH2P23942 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRPH2P23942 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms