Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.41■□□□□ 0.22
NCK1P16333 GCSHP2-201ENST00000560971 527 ntBASIC16.41■□□□□ 0.22
NCK1P16333 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NCK1P16333 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 AC079602.3-201ENST00000623931 403 ntBASIC16.41■□□□□ 0.22
NCK1P16333 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 AL391005.1-201ENST00000623953 2435 ntBASIC16.41■□□□□ 0.22
NCK1P16333 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NCK1P16333 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.41■□□□□ 0.22
NCK1P16333 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.41■□□□□ 0.22
NCK1P16333 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCK1P16333 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
NCK1P16333 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 NFIC-211ENST00000641145 8399 ntBASIC16.4■□□□□ 0.22
NCK1P16333 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.4■□□□□ 0.22
NCK1P16333 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.4■□□□□ 0.22
NCK1P16333 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.4■□□□□ 0.22
NCK1P16333 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.4■□□□□ 0.22
NCK1P16333 AL512604.3-201ENST00000569583 964 ntBASIC16.4■□□□□ 0.22
NCK1P16333 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NCK1P16333 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.4■□□□□ 0.22
NCK1P16333 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NCK1P16333 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.4■□□□□ 0.22
NCK1P16333 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCK1P16333 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
NCK1P16333 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms