Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFRAP16234 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFRAP16234 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 SPDYE21P-201ENST00000413323 827 ntBASIC18.2■□□□□ 0.5
PDGFRAP16234 AL020989.1-201ENST00000422979 469 ntBASIC18.2■□□□□ 0.5
PDGFRAP16234 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFRAP16234 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFRAP16234 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PDGFRAP16234 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFRAP16234 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDGFRAP16234 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFRAP16234 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFRAP16234 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFRAP16234 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PDGFRAP16234 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
PDGFRAP16234 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDGFRAP16234 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFRAP16234 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 AC026396.1-201ENST00000419388 421 ntBASIC18.19■□□□□ 0.5
PDGFRAP16234 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PDGFRAP16234 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 AF238378.1-201ENST00000526806 358 ntBASIC18.19■□□□□ 0.5
PDGFRAP16234 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFRAP16234 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFRAP16234 AC093525.9-201ENST00000624961 1746 ntBASIC18.19■□□□□ 0.5
PDGFRAP16234 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFRAP16234 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFRAP16234 AC148477.5-201ENST00000625164 1645 ntBASIC18.19■□□□□ 0.5
PDGFRAP16234 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDGFRAP16234 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFRAP16234 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFRAP16234 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFRAP16234 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFRAP16234 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFRAP16234 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 SIGLEC30P-201ENST00000455569 941 ntBASIC18.18■□□□□ 0.5
PDGFRAP16234 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFRAP16234 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.18■□□□□ 0.5
PDGFRAP16234 AC106795.1-205ENST00000512851 1056 ntBASIC18.18■□□□□ 0.5
PDGFRAP16234 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.18■□□□□ 0.5
PDGFRAP16234 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFRAP16234 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 AC080080.1-201ENST00000625121 2420 ntBASIC18.18■□□□□ 0.5
PDGFRAP16234 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFRAP16234 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
PDGFRAP16234 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFRAP16234 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms