Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.14■□□□□ 0.65
TPM1P09493 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.14■□□□□ 0.65
TPM1P09493 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 CYP2D8P-201ENST00000433633 1490 ntBASIC19.14■□□□□ 0.65
TPM1P09493 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPM1P09493 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
TPM1P09493 KRT18P48-201ENST00000434763 852 ntBASIC19.13■□□□□ 0.65
TPM1P09493 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 AC010947.1-201ENST00000623454 693 ntBASIC19.13■□□□□ 0.65
TPM1P09493 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TPM1P09493 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TPM1P09493 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM1P09493 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM1P09493 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 LINC02012-201ENST00000608206 1725 ntBASIC19.12■□□□□ 0.65
TPM1P09493 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.12■□□□□ 0.65
TPM1P09493 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.12■□□□□ 0.65
TPM1P09493 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.12■□□□□ 0.65
TPM1P09493 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.12■□□□□ 0.65
TPM1P09493 AC004263.2-201ENST00000617183 678 ntBASIC19.12■□□□□ 0.65
TPM1P09493 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.12■□□□□ 0.65
TPM1P09493 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM1P09493 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM1P09493 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms