Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV3P03979 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRGV3P03979 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV3P03979 AL139327.4-201ENST00000612362 153 ntBASIC13.67□□□□□ -0.22
TRGV3P03979 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV3P03979 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV3P03979 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV3P03979 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV3P03979 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV3P03979 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV3P03979 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV3P03979 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV3P03979 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV3P03979 AL353593.2-201ENST00000602529 1483 ntBASIC13.67□□□□□ -0.22
TRGV3P03979 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV3P03979 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TRGV3P03979 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV3P03979 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.66□□□□□ -0.22
TRGV3P03979 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.66□□□□□ -0.22
TRGV3P03979 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRGV3P03979 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV3P03979 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.66□□□□□ -0.22
TRGV3P03979 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRGV3P03979 AL691432.3-201ENST00000621860 400 ntBASIC13.66□□□□□ -0.22
TRGV3P03979 AD001527.2-201ENST00000622994 785 ntBASIC13.66□□□□□ -0.22
TRGV3P03979 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRGV3P03979 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV3P03979 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV3P03979 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV3P03979 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 AL450487.1-201ENST00000426799 995 ntBASIC13.65□□□□□ -0.22
TRGV3P03979 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 STK25P1-201ENST00000585406 838 ntBASIC13.65□□□□□ -0.22
TRGV3P03979 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.65□□□□□ -0.22
TRGV3P03979 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.65□□□□□ -0.22
TRGV3P03979 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 AP001269.4-201ENST00000609611 512 ntBASIC13.65□□□□□ -0.22
TRGV3P03979 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV3P03979 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRGV3P03979 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV3P03979 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRGV3P03979 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV3P03979 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV3P03979 AP005117.1-201ENST00000584346 1413 ntBASIC13.64□□□□□ -0.23
TRGV3P03979 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms