Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 AC133963.1-201ENST00000504166 1679 ntBASIC17.87■□□□□ 0.45
TSPAN3O60637 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.86■□□□□ 0.45
TSPAN3O60637 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.86■□□□□ 0.45
TSPAN3O60637 AC108751.1-201ENST00000490852 363 ntBASIC17.86■□□□□ 0.45
TSPAN3O60637 RPS15P9-201ENST00000494093 319 ntBASIC17.86■□□□□ 0.45
TSPAN3O60637 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.86■□□□□ 0.45
TSPAN3O60637 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TSPAN3O60637 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.86■□□□□ 0.45
TSPAN3O60637 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.86■□□□□ 0.45
TSPAN3O60637 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TSPAN3O60637 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 PTCHD3P3-201ENST00000403073 906 ntBASIC17.85■□□□□ 0.45
TSPAN3O60637 MED15P5-201ENST00000423150 992 ntBASIC17.85■□□□□ 0.45
TSPAN3O60637 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.85■□□□□ 0.45
TSPAN3O60637 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 AC068880.1-201ENST00000507289 2297 ntBASIC17.85■□□□□ 0.45
TSPAN3O60637 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.85■□□□□ 0.45
TSPAN3O60637 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.85■□□□□ 0.45
TSPAN3O60637 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 PGM5P2-202ENST00000637225 1043 ntBASIC17.85■□□□□ 0.45
TSPAN3O60637 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.85■□□□□ 0.45
TSPAN3O60637 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TSPAN3O60637 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
TSPAN3O60637 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.84■□□□□ 0.45
TSPAN3O60637 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.84■□□□□ 0.45
TSPAN3O60637 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TSPAN3O60637 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TSPAN3O60637 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.84■□□□□ 0.45
TSPAN3O60637 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.84■□□□□ 0.45
TSPAN3O60637 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.84■□□□□ 0.45
TSPAN3O60637 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.84■□□□□ 0.45
TSPAN3O60637 AC027601.4-201ENST00000611259 610 ntBASIC17.84■□□□□ 0.45
TSPAN3O60637 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TSPAN3O60637 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TSPAN3O60637 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TSPAN3O60637 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms