Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CUBNO60494 AL031598.1-201ENST00000561511 1773 ntBASIC13.72□□□□□ -0.21
CUBNO60494 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.72□□□□□ -0.21
CUBNO60494 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.72□□□□□ -0.21
CUBNO60494 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 RARRES2P8-201ENST00000566335 367 ntBASIC13.72□□□□□ -0.21
CUBNO60494 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.72□□□□□ -0.21
CUBNO60494 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CUBNO60494 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 AC005237.2-201ENST00000434368 219 ntBASIC13.72□□□□□ -0.21
CUBNO60494 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.72□□□□□ -0.21
CUBNO60494 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUBNO60494 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.71□□□□□ -0.21
CUBNO60494 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.71□□□□□ -0.21
CUBNO60494 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CUBNO60494 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.71□□□□□ -0.21
CUBNO60494 GIMAP3P-201ENST00000495150 836 ntBASIC13.71□□□□□ -0.21
CUBNO60494 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.71□□□□□ -0.21
CUBNO60494 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.71□□□□□ -0.21
CUBNO60494 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.71□□□□□ -0.21
CUBNO60494 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CUBNO60494 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 AC093677.2-201ENST00000600169 1863 ntBASIC13.71□□□□□ -0.21
CUBNO60494 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 AC073592.3-201ENST00000625118 1834 ntBASIC13.71□□□□□ -0.21
CUBNO60494 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUBNO60494 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CUBNO60494 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 DDX43P3-201ENST00000441064 443 ntBASIC13.71□□□□□ -0.22
CUBNO60494 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.71□□□□□ -0.22
CUBNO60494 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CUBNO60494 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUBNO60494 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 UXT-AS1-201ENST00000590504 1525 ntBASIC13.7□□□□□ -0.22
CUBNO60494 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 FAM86C2P-203ENST00000528684 1004 ntBASIC13.7□□□□□ -0.22
CUBNO60494 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 AL135999.2-201ENST00000622438 1686 ntBASIC13.7□□□□□ -0.22
CUBNO60494 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 TMEM14DP-201ENST00000422205 345 ntBASIC13.7□□□□□ -0.22
CUBNO60494 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.7□□□□□ -0.22
CUBNO60494 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.7□□□□□ -0.22
CUBNO60494 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUBNO60494 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.7□□□□□ -0.22
CUBNO60494 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms