Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL671277.2-201ENST00000458060 996 ntBASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC091607.1-201ENST00000490318 1060 ntBASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 DUX4L17-201ENST00000557360 1267 ntBASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC011467.2-201ENST00000598425 242 ntBASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-3A0A0A0MS03 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV5-3A0A0A0MS03 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRBV5-3A0A0A0MS03 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.18
TRBV5-3A0A0A0MS03 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV5-3A0A0A0MS03 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC046158.3-201ENST00000624947 2558 ntBASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC022616.7-201ENST00000525383 220 ntBASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-3A0A0A0MS03 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC009533.2-201ENST00000543664 586 ntBASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms