Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 AC046185.3-201ENST00000623228 1824 ntBASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 GAS2L1P1-201ENST00000420145 1480 ntBASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01558Q9Y6Z2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AP005117.1-202ENST00000581724 1908 ntBASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AC232323.1-201ENST00000540724 2099 ntBASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 REXO1L5P-201ENST00000622260 2098 ntBASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TSPY21P-201ENST00000433481 731 ntBASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AL603832.2-201ENST00000566195 2125 ntBASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LINC01558Q9Y6Z2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms