Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 PRSS29P-201ENST00000440800 595 ntBASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 MIR4751-201ENST00000578027 74 ntBASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 AL590787.1-201ENST00000568856 1315 ntBASIC15.42■□□□□ 0.06
CLCF1Q9UBD9 NOC2LP1-202ENST00000452600 2235 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AC133963.1-201ENST00000504166 1679 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AC008764.6-201ENST00000595909 2069 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AC040169.1-201ENST00000565382 521 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 LYSMD4-203ENST00000378904 2122 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 AL355312.1-201ENST00000407115 2176 ntBASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCF1Q9UBD9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 VN2R19P-201ENST00000442399 1052 ntBASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 AC092865.5-201ENST00000545435 363 ntBASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 GPALPP1-207ENST00000611650 899 ntBASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms