Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HPS4Q9NQG7 AC009336.1-201ENST00000608941 1553 ntBASIC17.96■□□□□ 0.46
HPS4Q9NQG7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HPS4Q9NQG7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 IGHV3-52-201ENST00000519770 353 ntBASIC17.95■□□□□ 0.46
HPS4Q9NQG7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 AC005829.1-201ENST00000570002 483 ntBASIC17.95■□□□□ 0.46
HPS4Q9NQG7 AC027796.2-201ENST00000575326 344 ntBASIC17.95■□□□□ 0.46
HPS4Q9NQG7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 AC097637.2-201ENST00000624096 1997 ntBASIC17.95■□□□□ 0.46
HPS4Q9NQG7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.95■□□□□ 0.46
HPS4Q9NQG7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HPS4Q9NQG7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 PTCHD3P3-201ENST00000403073 906 ntBASIC17.94■□□□□ 0.46
HPS4Q9NQG7 HMGN1P19-201ENST00000436976 333 ntBASIC17.94■□□□□ 0.46
HPS4Q9NQG7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 AL353135.1-201ENST00000606729 504 ntBASIC17.94■□□□□ 0.46
HPS4Q9NQG7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 GPR89P-201ENST00000407924 1495 ntBASIC17.94■□□□□ 0.46
HPS4Q9NQG7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPS4Q9NQG7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 MIR4469-201ENST00000583919 79 ntBASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms