Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 PRORSD1P-201ENST00000295112 541 ntBASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 AC112698.1-201ENST00000510299 916 ntBASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 HLA-A-202ENST00000376806 1854 ntBASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 AC007663.1-201ENST00000438948 1240 ntBASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 CCR12P-201ENST00000446203 998 ntBASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CKAP2Q8WWK9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 AC092865.7-201ENST00000641832 219 ntBASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CKAP2Q8WWK9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms