Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 LINC01311-201ENST00000565162 1445 ntBASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 AL365203.3-201ENST00000609742 2057 ntBASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM11BQ8TCY0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 KRT8P9-201ENST00000558927 1449 ntBASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM11BQ8TCY0 AC083906.2-201ENST00000511578 360 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms