Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 AC148477.5-201ENST00000625164 1645 ntBASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 MINOS1P3-201ENST00000457048 203 ntBASIC19.56■□□□□ 0.72
SHC4Q6S5L8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 AL358472.4-201ENST00000633140 710 ntBASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 FRMD8P1-201ENST00000440433 1524 ntBASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC4Q6S5L8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 AP000550.4-202ENST00000639755 178 ntBASIC19.55■□□□□ 0.72
SHC4Q6S5L8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC4Q6S5L8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 AC074051.2-201ENST00000565115 352 ntBASIC19.54■□□□□ 0.72
SHC4Q6S5L8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.54■□□□□ 0.72
SHC4Q6S5L8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms