Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH17Q12864 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH17Q12864 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH17Q12864 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH17Q12864 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH17Q12864 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH17Q12864 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 AC060834.1-201ENST00000443027 2032 ntBASIC17.55■□□□□ 0.4
CDH17Q12864 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH17Q12864 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH17Q12864 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH17Q12864 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 OR6D1P-203ENST00000641209 4860 ntBASIC17.54■□□□□ 0.4
CDH17Q12864 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH17Q12864 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH17Q12864 AC010331.1-201ENST00000611423 582 ntBASIC17.54■□□□□ 0.4
CDH17Q12864 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH17Q12864 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 AL135999.2-201ENST00000622438 1686 ntBASIC17.54■□□□□ 0.4
CDH17Q12864 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH17Q12864 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH17Q12864 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH17Q12864 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH17Q12864 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH17Q12864 AC092119.3-201ENST00000612618 583 ntBASIC17.53■□□□□ 0.4
CDH17Q12864 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.53■□□□□ 0.4
CDH17Q12864 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CDH17Q12864 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH17Q12864 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 PMPCAP1-201ENST00000508114 1576 ntBASIC17.53■□□□□ 0.4
CDH17Q12864 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH17Q12864 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDH17Q12864 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH17Q12864 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms