Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 KRT16P4-201ENST00000453883 522 ntBASIC15.17■□□□□ 0.02
HIST1H3AP68431 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 AC073592.4-201ENST00000623827 446 ntBASIC15.17■□□□□ 0.02
HIST1H3AP68431 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HIST1H3AP68431 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 SIGLEC16-201ENST00000599858 1437 ntBASIC15.17■□□□□ 0.02
HIST1H3AP68431 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H3AP68431 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 SPDYE21P-201ENST00000413323 827 ntBASIC15.16■□□□□ 0.02
HIST1H3AP68431 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 AC093458.2-201ENST00000623150 629 ntBASIC15.16■□□□□ 0.02
HIST1H3AP68431 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 AC022211.2-201ENST00000585075 2527 ntBASIC15.16■□□□□ 0.02
HIST1H3AP68431 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H3AP68431 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HIST1H3AP68431 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 EGFEM1P-202ENST00000431685 1563 ntBASIC15.15■□□□□ 0.02
HIST1H3AP68431 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 AL020989.1-201ENST00000422979 469 ntBASIC15.15■□□□□ 0.02
HIST1H3AP68431 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 AC124947.2-201ENST00000547118 1133 ntBASIC15.15■□□□□ 0.02
HIST1H3AP68431 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms