Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.56■■□□□ 1.2
COL5A2P05997 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL5A2P05997 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL5A2P05997 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
COL5A2P05997 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.55■■□□□ 1.2
COL5A2P05997 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.55■■□□□ 1.2
COL5A2P05997 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.55■■□□□ 1.2
COL5A2P05997 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
COL5A2P05997 AC027307.3-201ENST00000594262 1100 ntBASIC22.55■■□□□ 1.2
COL5A2P05997 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC22.55■■□□□ 1.2
COL5A2P05997 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.55■■□□□ 1.2
COL5A2P05997 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC22.55■■□□□ 1.2
COL5A2P05997 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL5A2P05997 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
COL5A2P05997 LYSMD4-203ENST00000378904 2122 ntBASIC22.55■■□□□ 1.2
COL5A2P05997 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
COL5A2P05997 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.54■■□□□ 1.2
COL5A2P05997 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL5A2P05997 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL5A2P05997 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
COL5A2P05997 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.54■■□□□ 1.2
COL5A2P05997 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL5A2P05997 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.54■■□□□ 1.2
COL5A2P05997 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.54■■□□□ 1.2
COL5A2P05997 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.53■■□□□ 1.2
COL5A2P05997 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL5A2P05997 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC22.53■■□□□ 1.2
COL5A2P05997 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.53■■□□□ 1.2
COL5A2P05997 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.53■■□□□ 1.2
COL5A2P05997 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.53■■□□□ 1.2
COL5A2P05997 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL5A2P05997 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
COL5A2P05997 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
COL5A2P05997 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC22.52■■□□□ 1.2
COL5A2P05997 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC22.52■■□□□ 1.2
COL5A2P05997 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22.52■■□□□ 1.2
COL5A2P05997 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.52■■□□□ 1.2
COL5A2P05997 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC22.52■■□□□ 1.2
COL5A2P05997 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC22.52■■□□□ 1.2
COL5A2P05997 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL5A2P05997 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.52■■□□□ 1.2
COL5A2P05997 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL5A2P05997 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
COL5A2P05997 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.51■■□□□ 1.19
COL5A2P05997 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.51■■□□□ 1.19
COL5A2P05997 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 U91328.1-201ENST00000437528 223 ntBASIC22.51■■□□□ 1.19
COL5A2P05997 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms