Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
P04436 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
P04436 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
P04436 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 MIR574-201ENST00000385209 96 ntBASIC15.86■□□□□ 0.13
P04436 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 ELK2BP-201ENST00000415014 1224 ntBASIC15.86■□□□□ 0.13
P04436 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
P04436 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.86■□□□□ 0.13
P04436 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.86■□□□□ 0.13
P04436 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
P04436 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P04436 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.86■□□□□ 0.13
P04436 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.85■□□□□ 0.13
P04436 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.85■□□□□ 0.13
P04436 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
P04436 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.85■□□□□ 0.13
P04436 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
P04436 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
P04436 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 MIR940-201ENST00000401276 94 ntBASIC15.85■□□□□ 0.13
P04436 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
P04436 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.85■□□□□ 0.13
P04436 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
P04436 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 TERC-201ENST00000602385 541 ntBASIC15.85■□□□□ 0.13
P04436 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
P04436 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.85■□□□□ 0.13
P04436 AL135999.2-201ENST00000622438 1686 ntBASIC15.85■□□□□ 0.13
P04436 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
P04436 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.85■□□□□ 0.13
P04436 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
P04436 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
P04436 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.85■□□□□ 0.13
P04436 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.84■□□□□ 0.13
P04436 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
P04436 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.84■□□□□ 0.13
P04436 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.84■□□□□ 0.13
P04436 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.84■□□□□ 0.13
P04436 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
P04436 AC108751.1-201ENST00000490852 363 ntBASIC15.84■□□□□ 0.13
P04436 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.84■□□□□ 0.13
P04436 AL353135.1-201ENST00000606729 504 ntBASIC15.84■□□□□ 0.13
P04436 AC027601.4-201ENST00000611259 610 ntBASIC15.84■□□□□ 0.13
P04436 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.84■□□□□ 0.13
P04436 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
P04436 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
P04436 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
P04436 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 GPR89P-201ENST00000407924 1495 ntBASIC15.84■□□□□ 0.13
P04436 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04436 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.84■□□□□ 0.13
P04436 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
P04436 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
P04436 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
P04436 LYSMD4-203ENST00000378904 2122 ntBASIC15.83■□□□□ 0.13
P04436 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
P04436 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
P04436 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms