Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
IFNA1P01562 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
IFNA1P01562 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
IFNA1P01562 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
IFNA1P01562 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.78□□□□□ -0.2
IFNA1P01562 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
IFNA1P01562 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
IFNA1P01562 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 LINC02012-201ENST00000608206 1725 ntBASIC13.78□□□□□ -0.2
IFNA1P01562 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 AL024508.2-201ENST00000607749 1894 ntBASIC13.78□□□□□ -0.2
IFNA1P01562 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IFNA1P01562 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IFNA1P01562 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.77□□□□□ -0.2
IFNA1P01562 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
IFNA1P01562 AC132872.4-202ENST00000622924 2756 ntBASIC13.77□□□□□ -0.2
IFNA1P01562 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
IFNA1P01562 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IFNA1P01562 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IFNA1P01562 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 MIR638-201ENST00000385237 100 ntBASIC13.77□□□□□ -0.21
IFNA1P01562 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IFNA1P01562 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.77□□□□□ -0.21
IFNA1P01562 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.77□□□□□ -0.21
IFNA1P01562 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.77□□□□□ -0.21
IFNA1P01562 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 AC036111.1-201ENST00000533973 1582 ntBASIC13.77□□□□□ -0.21
IFNA1P01562 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.77□□□□□ -0.21
IFNA1P01562 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.77□□□□□ -0.21
IFNA1P01562 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.77□□□□□ -0.21
IFNA1P01562 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.77□□□□□ -0.21
IFNA1P01562 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
IFNA1P01562 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.77□□□□□ -0.21
IFNA1P01562 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IFNA1P01562 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
IFNA1P01562 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.21
IFNA1P01562 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IFNA1P01562 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 AC132938.6-201ENST00000623828 1655 ntBASIC13.76□□□□□ -0.21
IFNA1P01562 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms