Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A3O75365 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A3O75365 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PTP4A3O75365 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.65■□□□□ 0.1
PTP4A3O75365 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.65■□□□□ 0.1
PTP4A3O75365 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.65■□□□□ 0.1
PTP4A3O75365 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.65■□□□□ 0.1
PTP4A3O75365 AC009533.2-201ENST00000543664 586 ntBASIC15.65■□□□□ 0.1
PTP4A3O75365 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 AC068418.2-201ENST00000577309 3703 ntBASIC15.65■□□□□ 0.1
PTP4A3O75365 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 PCDHA14-201ENST00000506751 2298 ntBASIC15.65■□□□□ 0.1
PTP4A3O75365 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PTP4A3O75365 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A3O75365 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A3O75365 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
PTP4A3O75365 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.64■□□□□ 0.09
PTP4A3O75365 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.64■□□□□ 0.09
PTP4A3O75365 AC091607.1-201ENST00000490318 1060 ntBASIC15.64■□□□□ 0.09
PTP4A3O75365 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.64■□□□□ 0.09
PTP4A3O75365 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A3O75365 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.64■□□□□ 0.09
PTP4A3O75365 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.64■□□□□ 0.09
PTP4A3O75365 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A3O75365 AL135999.2-201ENST00000622438 1686 ntBASIC15.63■□□□□ 0.09
PTP4A3O75365 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 AC092068.3-201ENST00000587894 2016 ntBASIC15.63■□□□□ 0.09
PTP4A3O75365 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 EGFEM1P-202ENST00000431685 1563 ntBASIC15.63■□□□□ 0.09
PTP4A3O75365 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A3O75365 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PTP4A3O75365 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.63■□□□□ 0.09
PTP4A3O75365 AL031133.1-201ENST00000406807 723 ntBASIC15.63■□□□□ 0.09
PTP4A3O75365 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.63■□□□□ 0.09
PTP4A3O75365 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A3O75365 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A3O75365 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A3O75365 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A3O75365 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.63■□□□□ 0.09
PTP4A3O75365 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms