Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SLC28A2O43868 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC28A2O43868 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SLC28A2O43868 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC28A2O43868 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC28A2O43868 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC28A2O43868 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC28A2O43868 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLC28A2O43868 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A2O43868 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A2O43868 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC28A2O43868 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC28A2O43868 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC28A2O43868 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 LINC00602-201ENST00000629776 2065 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC28A2O43868 AC211486.1-202ENST00000416371 468 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 AC211476.1-201ENST00000503899 468 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 IGHV3-22-201ENST00000520721 359 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 RFPL4AP1-201ENST00000530883 850 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC28A2O43868 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC28A2O43868 BNIP3P18-201ENST00000593976 575 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 AL596442.2-201ENST00000610240 980 ntBASIC16.76■□□□□ 0.27
SLC28A2O43868 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC28A2O43868 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
SLC28A2O43868 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC28A2O43868 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC28A2O43868 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC28A2O43868 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC28A2O43868 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC28A2O43868 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC28A2O43868 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
SLC28A2O43868 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CROCCP1-201ENST00000426910 5675 ntBASIC16.75■□□□□ 0.27
SLC28A2O43868 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 AL035633.1-201ENST00000406139 838 ntBASIC16.75■□□□□ 0.27
SLC28A2O43868 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC28A2O43868 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC28A2O43868 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC28A2O43868 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC28A2O43868 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC28A2O43868 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC28A2O43868 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC28A2O43868 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC28A2O43868 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms