Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RCN1P2-201ENST00000398357 915 ntBASIC16.63■□□□□ 0.25
BRF2Q9HAW0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
BRF2Q9HAW0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 EGFEM1P-202ENST00000431685 1563 ntBASIC16.62■□□□□ 0.25
BRF2Q9HAW0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BRF2Q9HAW0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 AP000867.3-201ENST00000524675 377 ntBASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BRF2Q9HAW0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms