Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CT55Q8WUE5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.11■□□□□ 0.17
CT55Q8WUE5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 AC004835.2-201ENST00000603762 682 ntBASIC16.1■□□□□ 0.17
CT55Q8WUE5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.1■□□□□ 0.17
CT55Q8WUE5 AC093028.1-201ENST00000622998 982 ntBASIC16.1■□□□□ 0.17
CT55Q8WUE5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 AC129492.6-201ENST00000611383 1305 ntBASIC16.1■□□□□ 0.17
CT55Q8WUE5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CT55Q8WUE5 LINC00304-203ENST00000565008 1864 ntBASIC16.1■□□□□ 0.17
CT55Q8WUE5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CT55Q8WUE5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 BICD1-207ENST00000551848 1962 ntBASIC16.09■□□□□ 0.17
CT55Q8WUE5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 AC105339.1-204ENST00000636249 355 ntBASIC16.09■□□□□ 0.17
CT55Q8WUE5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CT55Q8WUE5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CT55Q8WUE5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CT55Q8WUE5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CT55Q8WUE5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.08■□□□□ 0.16
CT55Q8WUE5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CT55Q8WUE5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CT55Q8WUE5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CT55Q8WUE5 AL139400.1-201ENST00000366220 510 ntBASIC16.08■□□□□ 0.16
CT55Q8WUE5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CT55Q8WUE5 AC004461.1-201ENST00000412461 403 ntBASIC16.08■□□□□ 0.16
CT55Q8WUE5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.08■□□□□ 0.16
CT55Q8WUE5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms