Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP2Q86T23 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP2Q86T23 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CROCCP2Q86T23 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 RPPH1-201ENST00000516869 333 ntBASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AP002490.2-201ENST00000524791 560 ntBASIC17.67■□□□□ 0.42
CROCCP2Q86T23 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.67■□□□□ 0.42
CROCCP2Q86T23 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 MST1L-201ENST00000442552 2185 ntBASIC17.66■□□□□ 0.42
CROCCP2Q86T23 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.66■□□□□ 0.42
CROCCP2Q86T23 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AC006058.3-201ENST00000606217 1069 ntBASIC17.66■□□□□ 0.42
CROCCP2Q86T23 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AC116562.4-202ENST00000641738 218 ntBASIC17.66■□□□□ 0.42
CROCCP2Q86T23 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP2Q86T23 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 AC007950.2-201ENST00000615045 2347 ntBASIC17.65■□□□□ 0.42
CROCCP2Q86T23 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 AL355802.2-201ENST00000402069 882 ntBASIC17.65■□□□□ 0.42
CROCCP2Q86T23 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP2Q86T23 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms