Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 UBALD1-205ENST00000590891 2641 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC003669.1-201ENST00000334569 611 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC124947.2-201ENST00000547118 1133 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 Z69720.1-201ENST00000601483 472 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 NPAP1P7-201ENST00000613027 823 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC078925.2-201ENST00000624013 1973 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 AC090340.1-201ENST00000620778 4980 ntBASIC19.59■□□□□ 0.73
SHC4Q6S5L8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHC4Q6S5L8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 PMPCAP1-201ENST00000508114 1576 ntBASIC19.58■□□□□ 0.73
SHC4Q6S5L8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 PCDHA14-201ENST00000506751 2298 ntBASIC19.58■□□□□ 0.73
SHC4Q6S5L8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHC4Q6S5L8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 LINC00265-3P-201ENST00000447588 903 ntBASIC19.58■□□□□ 0.72
SHC4Q6S5L8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC4Q6S5L8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 KLF4P1-201ENST00000412782 1185 ntBASIC19.57■□□□□ 0.72
SHC4Q6S5L8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.57■□□□□ 0.72
SHC4Q6S5L8 AC096582.2-201ENST00000510860 516 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms