Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 AL109659.2-201ENST00000606809 1674 ntBASIC16.35■□□□□ 0.21
TUBA4AP68366 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.35■□□□□ 0.21
TUBA4AP68366 DUTP2-201ENST00000519164 463 ntBASIC16.35■□□□□ 0.21
TUBA4AP68366 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.35■□□□□ 0.21
TUBA4AP68366 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 AC139887.4-201ENST00000607877 719 ntBASIC16.35■□□□□ 0.21
TUBA4AP68366 LINC01451-201ENST00000623792 534 ntBASIC16.35■□□□□ 0.21
TUBA4AP68366 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.35■□□□□ 0.21
TUBA4AP68366 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TUBA4AP68366 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TUBA4AP68366 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TUBA4AP68366 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TUBA4AP68366 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.34■□□□□ 0.21
TUBA4AP68366 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 LYSMD4-203ENST00000378904 2122 ntBASIC16.34■□□□□ 0.21
TUBA4AP68366 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBA4AP68366 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBA4AP68366 AC006011.2-201ENST00000621313 1158 ntBASIC16.34■□□□□ 0.21
TUBA4AP68366 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TUBA4AP68366 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TUBA4AP68366 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBA4AP68366 SDHAP2-201ENST00000455183 2001 ntBASIC16.34■□□□□ 0.21
TUBA4AP68366 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TUBA4AP68366 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBA4AP68366 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBA4AP68366 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA4AP68366 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA4AP68366 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA4AP68366 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.21
TUBA4AP68366 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBA4AP68366 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TUBA4AP68366 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TUBA4AP68366 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA4AP68366 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TUBA4AP68366 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA4AP68366 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TUBA4AP68366 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.33■□□□□ 0.21
TUBA4AP68366 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBA4AP68366 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA4AP68366 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBA4AP68366 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBA4AP68366 AC104076.2-201ENST00000448912 469 ntBASIC16.33■□□□□ 0.2
TUBA4AP68366 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBA4AP68366 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms