Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
WNT3AP56704 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
WNT3AP56704 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.57■□□□□ 0.4
WNT3AP56704 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
WNT3AP56704 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
WNT3AP56704 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
WNT3AP56704 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.57■□□□□ 0.4
WNT3AP56704 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
WNT3AP56704 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
WNT3AP56704 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
WNT3AP56704 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
WNT3AP56704 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
WNT3AP56704 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.56■□□□□ 0.4
WNT3AP56704 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.56■□□□□ 0.4
WNT3AP56704 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.56■□□□□ 0.4
WNT3AP56704 KRT18P56-201ENST00000507275 550 ntBASIC17.56■□□□□ 0.4
WNT3AP56704 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.56■□□□□ 0.4
WNT3AP56704 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
WNT3AP56704 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
WNT3AP56704 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
WNT3AP56704 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 AC079776.2-201ENST00000641154 1609 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 SIGLEC30P-201ENST00000455569 941 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 AC106795.1-205ENST00000512851 1056 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.55■□□□□ 0.4
WNT3AP56704 AC073592.4-201ENST00000623827 446 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.55■□□□□ 0.4
WNT3AP56704 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
WNT3AP56704 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 SIGLEC16-201ENST00000599858 1437 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.55■□□□□ 0.4
WNT3AP56704 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
WNT3AP56704 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
WNT3AP56704 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.54■□□□□ 0.4
WNT3AP56704 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
WNT3AP56704 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.54■□□□□ 0.4
WNT3AP56704 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
WNT3AP56704 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms