Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 MIR1238-201ENST00000408483 83 ntBASIC14.36□□□□□ -0.11
SNCAP37840 AC007663.1-201ENST00000438948 1240 ntBASIC14.36□□□□□ -0.11
SNCAP37840 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.36□□□□□ -0.11
SNCAP37840 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.36□□□□□ -0.11
SNCAP37840 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.36□□□□□ -0.11
SNCAP37840 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.36□□□□□ -0.11
SNCAP37840 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.36□□□□□ -0.11
SNCAP37840 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.36□□□□□ -0.11
SNCAP37840 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
SNCAP37840 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SNCAP37840 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNCAP37840 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.36□□□□□ -0.11
SNCAP37840 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.36□□□□□ -0.11
SNCAP37840 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCAP37840 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNCAP37840 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 HYMAI-201ENST00000635591 3347 ntBASIC14.35□□□□□ -0.11
SNCAP37840 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SNCAP37840 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.35□□□□□ -0.11
SNCAP37840 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SNCAP37840 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.35□□□□□ -0.11
SNCAP37840 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.35□□□□□ -0.11
SNCAP37840 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNCAP37840 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
SNCAP37840 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNCAP37840 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCAP37840 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SNCAP37840 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNCAP37840 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SNCAP37840 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCAP37840 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SNCAP37840 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SNCAP37840 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 AL390955.1-201ENST00000428694 934 ntBASIC14.34□□□□□ -0.11
SNCAP37840 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCAP37840 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms