Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 MFF-205ENST00000354503 1085 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC10.77□□□□□ -0.69
PDE6GP18545 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
PDE6GP18545 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.77□□□□□ -0.69
PDE6GP18545 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
PDE6GP18545 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
PDE6GP18545 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC10.76□□□□□ -0.69
PDE6GP18545 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 C1QL1P1-201ENST00000568105 661 ntBASIC10.76□□□□□ -0.69
PDE6GP18545 AC006557.6-201ENST00000623071 864 ntBASIC10.76□□□□□ -0.69
PDE6GP18545 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 MTHFR-217ENST00000641820 1569 ntBASIC10.76□□□□□ -0.69
PDE6GP18545 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.76□□□□□ -0.69
PDE6GP18545 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC10.76□□□□□ -0.69
PDE6GP18545 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PDE6GP18545 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PDE6GP18545 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.75□□□□□ -0.69
PDE6GP18545 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PDE6GP18545 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PDE6GP18545 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PDE6GP18545 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC10.75□□□□□ -0.69
PDE6GP18545 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.75□□□□□ -0.69
PDE6GP18545 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms