Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC004817.3-201ENST00000602957 2129 ntBASIC14.26□□□□□ -0.13
CGB3P0DN86 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CGB3P0DN86 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CGB3P0DN86 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 RBM17P3-201ENST00000417687 1192 ntBASIC14.25□□□□□ -0.13
CGB3P0DN86 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.25□□□□□ -0.13
CGB3P0DN86 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.25□□□□□ -0.13
CGB3P0DN86 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.25□□□□□ -0.13
CGB3P0DN86 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.25□□□□□ -0.13
CGB3P0DN86 AL121772.3-201ENST00000610840 674 ntBASIC14.25□□□□□ -0.13
CGB3P0DN86 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CGB3P0DN86 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 AD000864.1-201ENST00000624076 2295 ntBASIC14.25□□□□□ -0.13
CGB3P0DN86 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CGB3P0DN86 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CGB3P0DN86 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.24□□□□□ -0.13
CGB3P0DN86 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.24□□□□□ -0.13
CGB3P0DN86 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 AL732292.2-201ENST00000609649 430 ntBASIC14.24□□□□□ -0.13
CGB3P0DN86 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CGB3P0DN86 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.24□□□□□ -0.13
CGB3P0DN86 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CGB3P0DN86 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CGB3P0DN86 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.23□□□□□ -0.13
CGB3P0DN86 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.23□□□□□ -0.13
CGB3P0DN86 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.23□□□□□ -0.13
CGB3P0DN86 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CGB3P0DN86 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms