Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 PCDHA1-201ENST00000378133 2726 ntBASIC14.47□□□□□ -0.09
CTSDP07339 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSDP07339 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.46□□□□□ -0.09
CTSDP07339 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 PCDHB17P-201ENST00000539533 2393 ntBASIC14.46□□□□□ -0.09
CTSDP07339 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSDP07339 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CTSDP07339 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CTSDP07339 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSDP07339 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSDP07339 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSDP07339 AL512604.3-201ENST00000569583 964 ntBASIC14.46□□□□□ -0.09
CTSDP07339 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.46□□□□□ -0.09
CTSDP07339 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.46□□□□□ -0.09
CTSDP07339 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.46□□□□□ -0.09
CTSDP07339 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CTSDP07339 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CTSDP07339 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.46□□□□□ -0.1
CTSDP07339 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.46□□□□□ -0.1
CTSDP07339 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSDP07339 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSDP07339 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.46□□□□□ -0.1
CTSDP07339 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSDP07339 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSDP07339 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CTSDP07339 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 AC008894.3-201ENST00000624324 3103 ntBASIC14.45□□□□□ -0.1
CTSDP07339 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CTSDP07339 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 AL513523.2-202ENST00000427283 2040 ntBASIC14.45□□□□□ -0.1
CTSDP07339 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 AC093827.2-201ENST00000512654 315 ntBASIC14.45□□□□□ -0.1
CTSDP07339 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.45□□□□□ -0.1
CTSDP07339 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 AC066615.1-201ENST00000640911 628 ntBASIC14.45□□□□□ -0.1
CTSDP07339 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSDP07339 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSDP07339 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
CTSDP07339 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CTSDP07339 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CTSDP07339 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 LINC02199-201ENST00000506655 2702 ntBASIC14.44□□□□□ -0.1
CTSDP07339 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.44□□□□□ -0.1
CTSDP07339 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.44□□□□□ -0.1
CTSDP07339 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSDP07339 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms