Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 AF228730.7-201ENST00000641842 219 ntBASIC16.35■□□□□ 0.21
PRAMEF2O60811 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF2O60811 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF2O60811 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF2O60811 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF2O60811 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 AL049757.1-201ENST00000616842 1596 ntBASIC16.34■□□□□ 0.21
PRAMEF2O60811 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 PMS2P1-201ENST00000431037 1228 ntBASIC16.34■□□□□ 0.21
PRAMEF2O60811 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 GPALPP1-207ENST00000611650 899 ntBASIC16.34■□□□□ 0.21
PRAMEF2O60811 AL139327.4-201ENST00000612362 153 ntBASIC16.34■□□□□ 0.21
PRAMEF2O60811 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 AL353593.2-201ENST00000602529 1483 ntBASIC16.34■□□□□ 0.21
PRAMEF2O60811 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF2O60811 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF2O60811 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.33■□□□□ 0.21
PRAMEF2O60811 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF2O60811 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PRAMEF2O60811 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEF2O60811 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 AC139887.3-201ENST00000568585 713 ntBASIC16.33■□□□□ 0.2
PRAMEF2O60811 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEF2O60811 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF2O60811 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PRAMEF2O60811 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEF2O60811 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEF2O60811 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRAMEF2O60811 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF2O60811 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms