Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 AC073592.4-201ENST00000623827 446 ntBASIC16.71■□□□□ 0.27
PRAMEF4O60810 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF4O60810 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.71■□□□□ 0.26
PRAMEF4O60810 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF4O60810 AP005117.1-201ENST00000584346 1413 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 MIR3652-201ENST00000579335 131 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 AC012313.10-201ENST00000623509 926 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 AC099398.1-201ENST00000567919 2776 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 AC079776.2-201ENST00000641154 1609 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF4O60810 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF4O60810 SIGLEC16-201ENST00000599858 1437 ntBASIC16.7■□□□□ 0.26
PRAMEF4O60810 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 AC011676.5-201ENST00000624864 2660 ntBASIC16.69■□□□□ 0.26
PRAMEF4O60810 NKILA-202ENST00000614771 2598 ntBASIC16.69■□□□□ 0.26
PRAMEF4O60810 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 TSPY19P-201ENST00000418461 509 ntBASIC16.69■□□□□ 0.26
PRAMEF4O60810 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 TSPY18P-201ENST00000441642 509 ntBASIC16.69■□□□□ 0.26
PRAMEF4O60810 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 AL121761.2-201ENST00000598007 1648 ntBASIC16.69■□□□□ 0.26
PRAMEF4O60810 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEF4O60810 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF4O60810 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms