Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LINC02012-201ENST00000608206 1725 ntBASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC007322.1-201ENST00000426983 750 ntBASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC093787.1-201ENST00000450396 207 ntBASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KRT18P61-201ENST00000585825 1298 ntBASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 REXO1L11P-201ENST00000620964 1927 ntBASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC099343.3-201ENST00000605834 2503 ntBASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 PRKY-204ENST00000533551 1019 ntBASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TMEM256-PLSCR3K7ERE1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms