Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 TCAF2P1-201ENST00000291129 2421 ntBASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRCH1Q9Y2L9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 AC046185.3-201ENST00000623228 1824 ntBASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRCH1Q9Y2L9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 AC009102.3-201ENST00000623118 1491 ntBASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 KRT8P11-201ENST00000409686 1436 ntBASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 AC133681.1-201ENST00000465482 601 ntBASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH1Q9Y2L9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms