Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD9Q9P000 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD9Q9P000 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD9Q9P000 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COMMD9Q9P000 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
COMMD9Q9P000 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COMMD9Q9P000 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COMMD9Q9P000 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 AC116562.2-201ENST00000507042 360 ntBASIC14.89□□□□□ -0.03
COMMD9Q9P000 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.89□□□□□ -0.03
COMMD9Q9P000 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COMMD9Q9P000 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 MIR149-201ENST00000384879 89 ntBASIC14.88□□□□□ -0.03
COMMD9Q9P000 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 NUDT16P1-203ENST00000513809 620 ntBASIC14.88□□□□□ -0.03
COMMD9Q9P000 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 AC009102.3-201ENST00000623118 1491 ntBASIC14.88□□□□□ -0.03
COMMD9Q9P000 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COMMD9Q9P000 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
COMMD9Q9P000 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 AC103702.1-201ENST00000548801 2630 ntBASIC14.87□□□□□ -0.03
COMMD9Q9P000 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COMMD9Q9P000 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COMMD9Q9P000 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
COMMD9Q9P000 KRT8P7-201ENST00000533003 1432 ntBASIC14.87□□□□□ -0.03
COMMD9Q9P000 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms