Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 USP47-202ENST00000339865 7775 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CDC42SE1Q9NRR8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AC005912.2-201ENST00000619492 2400 ntBASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms