Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 DDX43P3-201ENST00000441064 443 ntBASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 AC009065.1-201ENST00000564055 1225 ntBASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 CKBP1-201ENST00000565489 1086 ntBASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3IPQ96QF0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 KRT8P9-201ENST00000558927 1449 ntBASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3IPQ96QF0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 SLC29A4P1-201ENST00000398760 971 ntBASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 TSPY6P-201ENST00000448518 926 ntBASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AC008622.2-201ENST00000617006 1229 ntBASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 AC036111.1-201ENST00000533973 1582 ntBASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3IPQ96QF0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17■□□□□ 0.31
RAB3IPQ96QF0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB3IPQ96QF0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB3IPQ96QF0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3IPQ96QF0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms