Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AL008721.1-201ENST00000609964 604 ntBASIC17.24■□□□□ 0.35
CLDN23Q96B33 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN23Q96B33 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN23Q96B33 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 AC092580.3-201ENST00000430932 139 ntBASIC17.23■□□□□ 0.35
CLDN23Q96B33 AC007274.1-201ENST00000439805 662 ntBASIC17.23■□□□□ 0.35
CLDN23Q96B33 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.23■□□□□ 0.35
CLDN23Q96B33 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 AC005412.3-201ENST00000580309 715 ntBASIC17.23■□□□□ 0.35
CLDN23Q96B33 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 AC025048.6-201ENST00000634326 1161 ntBASIC17.23■□□□□ 0.35
CLDN23Q96B33 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN23Q96B33 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN23Q96B33 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 NME2P1-201ENST00000426182 414 ntBASIC17.22■□□□□ 0.35
CLDN23Q96B33 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 AC004890.2-204ENST00000481968 304 ntBASIC17.22■□□□□ 0.35
CLDN23Q96B33 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 ALG1L8P-201ENST00000533887 760 ntBASIC17.22■□□□□ 0.35
CLDN23Q96B33 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 AL359881.2-201ENST00000602973 570 ntBASIC17.22■□□□□ 0.35
CLDN23Q96B33 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN23Q96B33 AC135776.1-201ENST00000319817 2481 ntBASIC17.22■□□□□ 0.35
CLDN23Q96B33 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN23Q96B33 KRT18P55-202ENST00000578578 1546 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 PIN1P1-201ENST00000412108 996 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 SERBP1P5-201ENST00000510079 1181 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 AL596325.1-201ENST00000563991 1082 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 AL662799.1-202ENST00000614205 422 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 MIR6080-201ENST00000617359 66 ntBASIC17.21■□□□□ 0.35
CLDN23Q96B33 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN23Q96B33 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN23Q96B33 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms