Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 FAM220CP-201ENST00000395253 831 ntBASIC17.65■□□□□ 0.42
PTCD2Q8WV60 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 MIR5100-201ENST00000579544 119 ntBASIC17.65■□□□□ 0.42
PTCD2Q8WV60 AC104692.2-201ENST00000603054 253 ntBASIC17.65■□□□□ 0.42
PTCD2Q8WV60 AC114341.1-201ENST00000618070 349 ntBASIC17.65■□□□□ 0.42
PTCD2Q8WV60 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTCD2Q8WV60 AC116353.5-201ENST00000638148 1699 ntBASIC17.64■□□□□ 0.42
PTCD2Q8WV60 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTCD2Q8WV60 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTCD2Q8WV60 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AC009078.2-202ENST00000463353 338 ntBASIC17.64■□□□□ 0.41
PTCD2Q8WV60 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AC103798.2-201ENST00000624292 632 ntBASIC17.64■□□□□ 0.41
PTCD2Q8WV60 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AL139384.1-201ENST00000612143 3047 ntBASIC17.64■□□□□ 0.41
PTCD2Q8WV60 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AL121761.2-201ENST00000598007 1648 ntBASIC17.64■□□□□ 0.41
PTCD2Q8WV60 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCD2Q8WV60 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AC004870.1-201ENST00000315132 882 ntBASIC17.63■□□□□ 0.41
PTCD2Q8WV60 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 HMGB3P14-201ENST00000494195 599 ntBASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AF238378.1-201ENST00000526806 358 ntBASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AC009533.2-201ENST00000543664 586 ntBASIC17.63■□□□□ 0.41
PTCD2Q8WV60 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
PTCD2Q8WV60 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms