Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 FITM1-202ENST00000559294 800 ntBASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 AC092850.2-201ENST00000623821 2697 ntBASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 MIR3917-201ENST00000580971 93 ntBASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 LINC01023-201ENST00000606054 436 ntBASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 AL139327.4-201ENST00000612362 153 ntBASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM42Q8IWZ5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM42Q8IWZ5 KRT8P9-201ENST00000558927 1449 ntBASIC17.39■□□□□ 0.38
TRIM42Q8IWZ5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 AC024243.1-201ENST00000609234 778 ntBASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 AC010653.2-201ENST00000623505 997 ntBASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms