Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
CRLF3Q8IUI8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 NEK4P2-201ENST00000580004 1012 ntBASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRLF3Q8IUI8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 HOMER2P1-201ENST00000455653 964 ntBASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 AL359075.1-203ENST00000462729 1002 ntBASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CRLF3Q8IUI8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms