Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 AC084121.4-201ENST00000641598 221 ntBASIC23.07■■□□□ 1.28
USP31Q70CQ4 AF228730.8-201ENST00000642140 221 ntBASIC23.07■■□□□ 1.28
USP31Q70CQ4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP31Q70CQ4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC23.07■■□□□ 1.28
USP31Q70CQ4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP31Q70CQ4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 FAM58DP-201ENST00000428076 619 ntBASIC23.06■■□□□ 1.28
USP31Q70CQ4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 DUX4L17-201ENST00000557360 1267 ntBASIC23.06■■□□□ 1.28
USP31Q70CQ4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 AL009183.1-201ENST00000603760 355 ntBASIC23.06■■□□□ 1.28
USP31Q70CQ4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.06■■□□□ 1.28
USP31Q70CQ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP31Q70CQ4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 LINC01225-203ENST00000563550 1244 ntBASIC23.05■■□□□ 1.28
USP31Q70CQ4 AC051619.7-201ENST00000568314 623 ntBASIC23.05■■□□□ 1.28
USP31Q70CQ4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 AC092364.2-202ENST00000597012 1073 ntBASIC23.05■■□□□ 1.28
USP31Q70CQ4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP31Q70CQ4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
USP31Q70CQ4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 Z92544.3-201ENST00000624747 417 ntBASIC23.04■■□□□ 1.28
USP31Q70CQ4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP31Q70CQ4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.04■■□□□ 1.28
USP31Q70CQ4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 SPCS2P4-201ENST00000436160 681 ntBASIC23.03■■□□□ 1.28
USP31Q70CQ4 AL592309.1-201ENST00000443127 649 ntBASIC23.03■■□□□ 1.28
USP31Q70CQ4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 AP001059.3-201ENST00000619053 235 ntBASIC23.03■■□□□ 1.28
USP31Q70CQ4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP31Q70CQ4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
USP31Q70CQ4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms