Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)14.51□□□□□ -0.091e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.09□□□□□ -0.151e-6■□□□□ 8.4
SRSF1Q07955 PKD1-235ENST00000568591 2545 ntTSL 213.9□□□□□ -0.181e-6■□□□□ 8.4
SRSF1Q07955 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.21e-6■□□□□ 8.4
SRSF1Q07955 TTC32-203ENST00000431392 779 ntTSL 313.6□□□□□ -0.231e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)13.39□□□□□ -0.271e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-208ENST00000541694 875 ntTSL 213.2□□□□□ -0.31e-6■□□□□ 8.4
SRSF1Q07955 METTL17-222ENST00000556733 510 ntTSL 512.75□□□□□ -0.371e-6■□□□□ 8.4
SRSF1Q07955 TTC32-202ENST00000402414 735 ntTSL 5 BASIC11.03□□□□□ -0.641e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC10.48□□□□□ -0.731e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-212ENST00000545885 559 ntTSL 210.4□□□□□ -0.741e-6■□□□□ 8.4
SRSF1Q07955 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC9.96□□□□□ -0.812e-9■□□□□ 8.4
SRSF1Q07955 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.841e-6■□□□□ 8.4
SRSF1Q07955 FILIP1L-210ENST00000495625 2898 ntTSL 1 (best)9.49□□□□□ -0.892e-9■□□□□ 8.4
SRSF1Q07955 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.82□□□□□ -1.642e-9■□□□□ 8.4
SRSF1Q07955 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.672e-9■□□□□ 8.4
SRSF1Q07955 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.19■■□□□ 1.147e-6■□□□□ 8.4
SRSF1Q07955 GATA2-AS1-203ENST00000473958 722 ntTSL 322.14■■□□□ 1.137e-6■□□□□ 8.4
SRSF1Q07955 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.77■□□□□ 0.927e-6■□□□□ 8.4
SRSF1Q07955 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.567e-6■□□□□ 8.4
SRSF1Q07955 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.73□□□□□ -0.697e-6■□□□□ 8.4
SRSF1Q07955 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.147e-6■□□□□ 8.4
SRSF1Q07955 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.67e-6■□□□□ 8.4
SRSF1Q07955 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.24□□□□□ -1.737e-6■□□□□ 8.4
SRSF1Q07955 PLCXD1-208ENST00000445062 555 ntTSL 421.43■■□□□ 1.021e-8■□□□□ 8.4
SRSF1Q07955 C1GALT1-203ENST00000419721 591 ntTSL 319.15■□□□□ 0.661e-8■□□□□ 8.4
SRSF1Q07955 C1GALT1-206ENST00000467716 458 ntTSL 516.89■□□□□ 0.291e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 214.86□□□□□ -0.031e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.111e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-211ENST00000484611 540 ntTSL 414.16□□□□□ -0.141e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-205ENST00000429181 469 ntTSL 413.79□□□□□ -0.21e-8■□□□□ 8.4
SRSF1Q07955 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)13.48□□□□□ -0.251e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.761e-8■□□□□ 8.4
SRSF1Q07955 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.791e-8■□□□□ 8.4
SRSF1Q07955 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.81e-8■□□□□ 8.4
SRSF1Q07955 C1GALT1-204ENST00000429911 802 ntTSL 58.62□□□□□ -1.031e-8■□□□□ 8.4
SRSF1Q07955 MIR34AHG-201ENST00000437157 409 ntTSL 518.78■□□□□ 0.63e-9■□□□□ 8.4
SRSF1Q07955 MIR34AHG-202ENST00000635405 529 ntTSL 418.76■□□□□ 0.593e-9■□□□□ 8.4
SRSF1Q07955 NAT9-202ENST00000577428 555 ntTSL 418.72■□□□□ 0.593e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.53■□□□□ 0.43e-8■□□□□ 8.4
SRSF1Q07955 NAT9-223ENST00000583689 563 ntTSL 216.59■□□□□ 0.253e-8■□□□□ 8.4
SRSF1Q07955 NAT9-221ENST00000582993 565 ntTSL 216.44■□□□□ 0.223e-8■□□□□ 8.4
SRSF1Q07955 NAT9-228ENST00000584409 545 ntTSL 316.44■□□□□ 0.223e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.023e-8■□□□□ 8.4
SRSF1Q07955 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.92□□□□□ -0.023e-8■□□□□ 8.4
SRSF1Q07955 NAT9-229ENST00000585240 554 ntTSL 414.92□□□□□ -0.023e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-214ENST00000549774 847 ntTSL 514.6□□□□□ -0.073e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-219ENST00000552202 1290 ntTSL 1 (best)14.41□□□□□ -0.13e-8■□□□□ 8.4
SRSF1Q07955 NAT9-218ENST00000582359 694 ntTSL 314.36□□□□□ -0.113e-8■□□□□ 8.4
SRSF1Q07955 NAT9-227ENST00000584022 1103 ntTSL 214.3□□□□□ -0.123e-8■□□□□ 8.4
SRSF1Q07955 NAT9-225ENST00000583834 1993 ntTSL 314.26□□□□□ -0.133e-8■□□□□ 8.4
SRSF1Q07955 NAT9-203ENST00000578798 695 ntTSL 314.14□□□□□ -0.153e-8■□□□□ 8.4
SRSF1Q07955 NAT9-217ENST00000582168 863 ntTSL 214.14□□□□□ -0.153e-8■□□□□ 8.4
SRSF1Q07955 NAT9-205ENST00000578862 549 ntTSL 414.07□□□□□ -0.163e-8■□□□□ 8.4
SRSF1Q07955 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.07□□□□□ -0.163e-8■□□□□ 8.4
SRSF1Q07955 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.183e-8■□□□□ 8.4
SRSF1Q07955 NAT9-216ENST00000582118 560 ntTSL 413.62□□□□□ -0.233e-8■□□□□ 8.4
SRSF1Q07955 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.46□□□□□ -0.253e-8■□□□□ 8.4
SRSF1Q07955 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.263e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-218ENST00000551723 415 ntTSL 513.41□□□□□ -0.263e-8■□□□□ 8.4
SRSF1Q07955 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.29□□□□□ -0.283e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-215ENST00000550535 770 ntTSL 313.05□□□□□ -0.323e-8■□□□□ 8.4
SRSF1Q07955 NAT9-219ENST00000582524 573 ntTSL 4 BASIC12.83□□□□□ -0.363e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.73□□□□□ -0.373e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.72□□□□□ -0.373e-8■□□□□ 8.4
SRSF1Q07955 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.62□□□□□ -0.393e-8■□□□□ 8.4
SRSF1Q07955 NAT9-204ENST00000578822 839 ntTSL 3 BASIC12.54□□□□□ -0.43e-8■□□□□ 8.4
SRSF1Q07955 NAT9-226ENST00000583989 463 ntTSL 412.53□□□□□ -0.43e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.16□□□□□ -0.463e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-220ENST00000552429 560 ntTSL 211.79□□□□□ -0.523e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-216ENST00000551406 648 ntTSL 211.55□□□□□ -0.563e-8■□□□□ 8.4
SRSF1Q07955 NAT9-207ENST00000579218 583 ntTSL 510.94□□□□□ -0.663e-8■□□□□ 8.4
SRSF1Q07955 NAT9-213ENST00000581451 584 ntTSL 310.85□□□□□ -0.673e-8■□□□□ 8.4
SRSF1Q07955 NAT9-209ENST00000580216 611 ntTSL 510.6□□□□□ -0.713e-8■□□□□ 8.4
SRSF1Q07955 NAT9-214ENST00000581466 497 ntTSL 510.57□□□□□ -0.723e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.723e-8■□□□□ 8.4
SRSF1Q07955 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.42□□□□□ -0.743e-9■□□□□ 8.4
SRSF1Q07955 PPHLN1-205ENST00000395568 2170 ntTSL 1 (best) BASIC9.14□□□□□ -0.953e-8■□□□□ 8.4
SRSF1Q07955 NAT9-206ENST00000578947 394 ntTSL 38.8□□□□□ -13e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.083e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC7.98□□□□□ -1.133e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.82□□□□□ -1.323e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.73□□□□□ -1.333e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC5.76□□□□□ -1.493e-8■□□□□ 8.4
SRSF1Q07955 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.83e-8■□□□□ 8.4
SRSF1Q07955 SRSF4-204ENST00000489898 393 ntTSL 311.44□□□□□ -0.588e-9■□□□□ 8.4
SRSF1Q07955 SRSF4-205ENST00000497015 516 ntTSL 210.38□□□□□ -0.758e-9■□□□□ 8.4
SRSF1Q07955 SRSF4-208ENST00000634348 8128 ntTSL 59.74□□□□□ -0.858e-9■□□□□ 8.4
SRSF1Q07955 RSRC2-208ENST00000525387 980 ntTSL 311.17□□□□□ -0.624e-7■□□□□ 8.3
SRSF1Q07955 RSRC2-216ENST00000528279 562 ntTSL 411.17□□□□□ -0.624e-7■□□□□ 8.3
SRSF1Q07955 RSRC2-213ENST00000527461 711 ntTSL 310.93□□□□□ -0.664e-7■□□□□ 8.3
SRSF1Q07955 RSRC2-209ENST00000525570 553 ntTSL 410.6□□□□□ -0.714e-7■□□□□ 8.3
SRSF1Q07955 SENP6-211ENST00000493959 867 ntTSL 321.58■■□□□ 1.056e-8■□□□□ 8.3
SRSF1Q07955 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.37■■□□□ 1.013e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-211ENST00000444719 762 ntTSL 320.96■□□□□ 0.953e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-205ENST00000430278 523 ntTSL 420.54■□□□□ 0.883e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-207ENST00000433968 578 ntTSL 420.54■□□□□ 0.883e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-210ENST00000434503 930 ntTSL 520.54■□□□□ 0.883e-6■□□□□ 8.3
SRSF1Q07955 LMBR1-217ENST00000485985 644 ntTSL 220.54■□□□□ 0.883e-6■□□□□ 8.3
SRSF1Q07955 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.97■□□□□ 0.793e-6■□□□□ 8.3
Retrieved 100 of 14,836 protein–RNA pairs in 107.7 ms