Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.9■□□□□ 0.46
ITGA8P53708 ZNF444P1-201ENST00000559497 298 ntBASIC17.9■□□□□ 0.46
ITGA8P53708 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.9■□□□□ 0.46
ITGA8P53708 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 AC145285.6-201ENST00000604632 637 ntBASIC17.9■□□□□ 0.46
ITGA8P53708 AL031432.5-201ENST00000641059 760 ntBASIC17.9■□□□□ 0.46
ITGA8P53708 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.9■□□□□ 0.46
ITGA8P53708 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ITGA8P53708 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
ITGA8P53708 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ITGA8P53708 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ITGA8P53708 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ITGA8P53708 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ITGA8P53708 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.89■□□□□ 0.45
ITGA8P53708 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 COX5BP2-201ENST00000392354 334 ntBASIC17.89■□□□□ 0.45
ITGA8P53708 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ITGA8P53708 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.89■□□□□ 0.45
ITGA8P53708 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.89■□□□□ 0.45
ITGA8P53708 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 GPR32P1-201ENST00000601788 811 ntBASIC17.89■□□□□ 0.45
ITGA8P53708 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.89■□□□□ 0.45
ITGA8P53708 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ITGA8P53708 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.89■□□□□ 0.45
ITGA8P53708 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
ITGA8P53708 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ITGA8P53708 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.88■□□□□ 0.45
ITGA8P53708 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.88■□□□□ 0.45
ITGA8P53708 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 MIR662-201ENST00000384847 95 ntBASIC17.88■□□□□ 0.45
ITGA8P53708 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.88■□□□□ 0.45
ITGA8P53708 AC011558.1-201ENST00000623459 338 ntBASIC17.88■□□□□ 0.45
ITGA8P53708 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
ITGA8P53708 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.88■□□□□ 0.45
ITGA8P53708 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ITGA8P53708 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ITGA8P53708 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ITGA8P53708 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 AL603756.1-201ENST00000606511 2163 ntBASIC17.87■□□□□ 0.45
ITGA8P53708 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.87■□□□□ 0.45
ITGA8P53708 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.87■□□□□ 0.45
ITGA8P53708 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.87■□□□□ 0.45
ITGA8P53708 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ITGA8P53708 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.87■□□□□ 0.45
ITGA8P53708 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ITGA8P53708 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ITGA8P53708 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.87■□□□□ 0.45
ITGA8P53708 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms