Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
MDH1P40925 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MDH1P40925 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MDH1P40925 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MDH1P40925 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MDH1P40925 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MDH1P40925 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.52■□□□□ 0.4
MDH1P40925 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.52■□□□□ 0.4
MDH1P40925 UNC93B5-201ENST00000530315 699 ntBASIC17.52■□□□□ 0.4
MDH1P40925 AC124947.2-201ENST00000547118 1133 ntBASIC17.52■□□□□ 0.4
MDH1P40925 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.52■□□□□ 0.4
MDH1P40925 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MDH1P40925 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.52■□□□□ 0.4
MDH1P40925 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.52■□□□□ 0.4
MDH1P40925 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MDH1P40925 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
MDH1P40925 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
MDH1P40925 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MDH1P40925 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
MDH1P40925 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.52■□□□□ 0.39
MDH1P40925 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MDH1P40925 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MDH1P40925 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
MDH1P40925 BX276092.7-203ENST00000637198 1536 ntBASIC17.52■□□□□ 0.39
MDH1P40925 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MDH1P40925 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MDH1P40925 AL355355.2-201ENST00000442321 338 ntBASIC17.51■□□□□ 0.39
MDH1P40925 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.51■□□□□ 0.39
MDH1P40925 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 AC008687.5-201ENST00000593746 558 ntBASIC17.51■□□□□ 0.39
MDH1P40925 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MDH1P40925 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
MDH1P40925 AC144831.1-201ENST00000573312 2656 ntBASIC17.51■□□□□ 0.39
MDH1P40925 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MDH1P40925 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.51■□□□□ 0.39
MDH1P40925 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
MDH1P40925 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 CA15P1-201ENST00000481698 905 ntBASIC17.5■□□□□ 0.39
MDH1P40925 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.5■□□□□ 0.39
MDH1P40925 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.5■□□□□ 0.39
MDH1P40925 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.5■□□□□ 0.39
MDH1P40925 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MDH1P40925 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.5■□□□□ 0.39
MDH1P40925 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MDH1P40925 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms